CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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xlcof28
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-9388441
T145628_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002942026
C2H2 ZF
135
157
HKCLECKKVFGSWSHLLAHRRTH
XP_002942026
C2H2 ZF
190
212
FQCSECEKTFSNQSVLSLHLRTH
XP_002942026
C2H2 ZF
218
240
FKCTECEKSFMKRAQLVVHKKCH
XP_002942026
C2H2 ZF
246
268
YKCTLCEKGYNQHSKLIEHLRTH
XP_002942026
C2H2 ZF
274
296
FTCTECKKSFTKRSHLTEHLRIH
XP_002942026
C2H2 ZF
302
324
YKCNLCEKTFHYPSNLVEHQRTH
XP_002942026
C2H2 ZF
330
352
YQCTECDKSFIKMSKLIVHLRIH
XP_002942026
C2H2 ZF
358
380
YKCNECNKSFSQQSNLVVHQRTH
XP_002942026
C2H2 ZF
386
408
FQCSHCKKSFSYHYALVVHQRTH
XP_002942026
C2H2 ZF
414
436
YQCSLCDKAFSQQSNLKLHQKTH
XP_002942026
C2H2 ZF
520
542
HKCTECDKCFLEKSKLIVHQRTH
XP_002942026
C2H2 ZF
548
570
FKCSVCDKTFIQWSHLSQHRKIH
XP_002942026
C2H2 ZF
576
598
YVCAECGKSFIRMSKLTVHRRTH
XP_002942026
C2H2 ZF
604
626
YICAECGKQFSQQSNLVVHQRIH
XP_002942026
C2H2 ZF
632
654
FKCTECEKTFRYQSALIKHRRNH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found