CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
gtf3a
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XB-GENE-979623
T145689_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002941582
C2H2 ZF
13
37
YICSYADCNAAYNKNWKLQAHMCKH
XP_002941582
C2H2 ZF
43
67
FHCKAEGCDKEFTRLYHLTRHSLSH
XP_002941582
C2H2 ZF
105
129
YVCHFENCGKMFKKHNQLKVHQFTH
XP_002941582
C2H2 ZF
135
159
YKCTHEGCDMRFNVPSRLKRHEKVH
XP_002941582
C2H2 ZF
192
214
LVCDVCKRKFKHKDILKDHKKIH
XP_002941582
C2H2 ZF
221
246
YRCPRDGCDRTYTTAFNLQNHVLVFH
XP_002941582
C2H2 ZF
252
276
FACEHAGCGKTFAMKQSLERHSVVH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found