CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002936838
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002936838
T145771_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002936838
C2H2 ZF
106
128
YVCMDCGKCFTHSSTLSTHQRTH
XP_002936838
C2H2 ZF
134
156
YGCSDCGKCFTRSSTLATHQRIH
XP_002936838
C2H2 ZF
162
184
YICMECGKTFIQSSHLVLHQRIH
XP_002936838
C2H2 ZF
190
212
YCCMDCGKRFSDRSHYVIHQRTH
XP_002936838
C2H2 ZF
218
240
YICTQCGKSFTSNSNLVAHYKLH
XP_002936838
C2H2 ZF
246
268
YICNQCGKSLSNRLTFASHQKTH
XP_002936838
C2H2 ZF
274
296
FVCVECGKGFTRKLQLVLHKRIH
XP_002936838
C2H2 ZF
302
324
FACKDCGKRYTRKSYLVIHQKIH
XP_002936838
C2H2 ZF
330
352
YVCSECGESFTFHSTLSTHQRTH
XP_002936838
C2H2 ZF
358
380
YGCSDCGKCFTRSSTLATHQRIH
XP_002936838
C2H2 ZF
386
408
YICMECGKTFIQSSHLVLHQRIH
XP_002936838
C2H2 ZF
414
436
YCCMDCGKRFSDRSHYVIHQRTH
XP_002936838
C2H2 ZF
442
464
YICTQCGKSFTSNSNLVAHYKLH
XP_002936838
C2H2 ZF
470
492
YICNQCGKSLSNRLTFASHQKTH
XP_002936838
C2H2 ZF
498
520
FVCVECGKGFTRKLQLVLHKRIH
XP_002936838
C2H2 ZF
526
548
FACKDCGKRYTRKSYLVIHQKIH
XP_002936838
C2H2 ZF
554
576
YVCSECGESFSEHSSLKTHQKCH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found