CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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XP_002939186
(
Xenopus tropicalis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
XP_002939186
T145792_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
XP_002939186
C2H2 ZF
144
166
FQCSFCNFVFQDLSELVQHQETH
XP_002939186
C2H2 ZF
194
216
YRCIVCDKTFCKQSSLVTHLRIH
XP_002939186
C2H2 ZF
222
244
YSCHVCRRKFNQRTSLTVHLRTH
XP_002939186
C2H2 ZF
250
272
FRCNKCNKSFRQQSNLTHHMKSH
XP_002939186
C2H2 ZF
331
353
FVCGHCFKRFTHQSNLMVHQRIH
XP_002939186
C2H2 ZF
359
381
YRCQECGKHFTRRTSLMVHLRGH
XP_002939186
C2H2 ZF
387
409
YSCQQCGKSFRQQSNLLYHMKSH
XP_002939186
C2H2 ZF
612
634
HKCWKCPRRFNNKSNLIVHLRIH
XP_002939186
C2H2 ZF
640
662
YQCWKCDKRFRQQSNLIQHLRNH
XP_002939186
C2H2 ZF
754
776
YKCGSCFKTFNHKSNLLVHERIH
XP_002939186
C2H2 ZF
782
804
YRCQECGKQFSQRTSLMVHLRTH
XP_002939186
C2H2 ZF
810
835
YSCQQCRRRFRQQSNLLYHIKTNTVH
XP_002939186
C2H2 ZF
898
920
FPCPDCDKVFTHQSNLLVHQRIH
XP_002939186
C2H2 ZF
926
948
YRCHECNRQFSQRTSLMIHLRTH
XP_002939186
C2H2 ZF
954
976
YACQCCGKRFRQQSNLLYHLKSH
XP_002939186
C2H2 ZF
1022
1044
FKCMECPRRYNLMSNLVAHQRSH
XP_002939186
C2H2 ZF
1050
1072
HTCSDCGEGFLQQSYLTVHKKLH
Links
Other
C2H2 ZF
family TFs
Other
Xenopus tropicalis
TFs
0 Related TFs
">No related TF found