CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g03189
(
Litomosoides sigmodontis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
nLs.2.1.2.g03189
T155328_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t03189-RA
C2H2 ZF
73
96
YKCDECGKEYNKEHNLKLHHLAQH
nLs.2.1.2.t03189-RA
C2H2 ZF
106
128
YICSFCPKKYARLAAYYAHLQIH
nLs.2.1.2.t03189-RA
C2H2 ZF
134
157
LTCAFCKEEFDFQAHLNKHLRLQH
nLs.2.1.2.t03189-RA
C2H2 ZF
220
242
FVCEICGKRFSQKASLGQHTLTH
nLs.2.1.2.t03189-RA
C2H2 ZF
250
273
HKCSLCDATFSQAGNLRRHVKLLH
nLs.2.1.2.t03189-RA
C2H2 ZF
283
306
FRCLKCTCVFNSLQPLQVHSRKRH
nLs.2.1.2.t03189-RA
C2H2 ZF
333
355
FCCCMCEKAFGKTSDLVRHYRIH
nLs.2.1.2.t03189-RA
C2H2 ZF
361
383
FSCNRCGRDFNLKSSLKLHMDSH
nLs.2.1.2.t03189-RA
C2H2 ZF
393
418
YTCARCPVCMKQLASAPSLRRHLKIH
nLs.2.1.2.t03189-RA
C2H2 ZF
475
497
YKCRTCTASFSSLRCLKEHINRH
nLs.2.1.2.t03189-RA
C2H2 ZF
531
553
FKCLICDQTFRRRSHLKAHTATH
nLs.2.1.2.t03189-RA
C2H2 ZF
638
659
TRCPVCFFSFSSDATLSTHLYN
nLs.2.1.2.t03189-RA
C2H2 ZF
671
694
LACNHCSKTFSGCVGLADHLQAFH
nLs.2.1.2.t03189-RA
C2H2 ZF
719
741
HVCDVCDRRFKKPSDLVRHKRIH
nLs.2.1.2.t03189-RA
C2H2 ZF
747
769
FLCGICERSFRVKSTLYQHLKIH
nLs.2.1.2.t03189-RA
C2H2 ZF
778
800
MCSLCKRCYCSLSALRQHLYLAH
nLs.2.1.2.t03189-RA
C2H2 ZF
806
831
FKCSDETCSERFKTARSRDAHVRQLH
nLs.2.1.2.t03189-RA
C2H2 ZF
1013
1030
NCVICDESFSTQEESDAH
nLs.2.1.2.t03189-RA
C2H2 ZF
1072
1094
VCKLCLEQFQDRECLLAHIRREH
Links
Other
C2H2 ZF
family TFs
Other
Litomosoides sigmodontis
TFs
0 Related TFs
">No related TF found