CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf00683-augustus-gene-0.15
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
maker-nMf.1.1.scaf00683-augustus-gene-0.15
T197587_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf00683-augustus-gene-0.15-mRNA-1
GATA
5
38
CFNCGSKHNIPWYNYLNEQNLCKLCFAYRHKYVH
maker-nMf.1.1.scaf00683-augustus-gene-0.15-mRNA-1
GATA
380
414
CFNCWAKQTSQWYNYLKGQYLCDACFAYRRRHKGK
maker-nMf.1.1.scaf00683-augustus-gene-0.15-mRNA-1
GATA
435
467
CCICGSTKIVNYRDSEPGNYLCTSCYWKQHREK
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
0 Related TFs
">No related TF found