CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Y749_MIMIV
(
Acanthamoeba polyphaga mimivirus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Y749_MIMIV
T226953_2.00
HughesLab (2013-Jun-13)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Y749_MIMIV
M02219_2.00
Acanthamoeba polyphaga mimivirus
TTAATAWW
WWTATTAA
PBM
Weirauch et al.(2014)
pTH6115
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.599
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02219_2.00
Homeodomain
1
55
KRVRLSDEERNILESQYSKNNFPSPEIRDELAKKIGKTPRQVQIWFQNKRCKDRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y749_MIMIV
Homeodomain
164
218
KRVRLSDEERNILESQYSKNNFPSPEIRDELAKKIGKTPRQVQIWFQNKRCKDRK
Links
Other
Homeodomain
family TFs
Other
Acanthamoeba polyphaga mimivirus
TFs
0 Related TFs
">No related TF found