EFV57892 (Trichinella spiralis)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		EFV57892 T237257_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ey
M03896_2.00 		Drosophila melanogaster
CKAATTAD
HTAATTMG		 SELEX
Nitta et al.(2015)
ey_1 		0.864 0.864
ey
M03897_2.00 		Drosophila melanogaster
HTAATCKMATTAD
HTAATKMGATTAD		 SELEX
Nitta et al.(2015)
ey_2 		0.864 0.864
ey
M03898_2.00 		Drosophila melanogaster
WAAYYRRTTN
NAAYYRRTTW		 SELEX
Nitta et al.(2015)
ey_3 		0.864 0.864
PAX6
M00342_2.00 		Homo sapiens
NNNRCDMATTANNN
NNNTAATKHGYNNN		 PBM
Barrera et al.(2016)
PAX6_REF 		0.853 0.853
Pax6
M00540_2.00 		Mus musculus
CBAATTAA
TTAATTVG		 PBM
Berger et al.(2008)
Pax6_3838 		0.853 0.853
PAX6
M03291_2.00 		Homo sapiens
DTWYACGCWTGANTGMDYH
DRHKCANTCAWGCGTRWAH		 SELEX
Jolma et al.(2013)
PAX6_1 		0.853 0.853
toy
M03899_2.00 		Drosophila melanogaster
TTYACGCWTGASTGMACAN
NTGTKCASTCAWGCGTRAA		 SELEX
Nitta et al.(2015)
toy_1 		0.853 0.853
toy
M03900_2.00 		Drosophila melanogaster
NTYACGCWTSAVTGMRCNN
NNGYKCABTSAWGCGTRAN		 SELEX
Nitta et al.(2015)
toy_2 		0.853 0.853
toy
M03901_2.00 		Drosophila melanogaster
VATTANBHAYGSWYSRN
NYSRWSCRTDVNTAATB		 SELEX
Nitta et al.(2015)
toy_3 		0.853 0.853
PAX6
M05412_2.00 		Homo sapiens
NYACGCHYSRNYRMNYN
NRNKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX 		0.853 0.853
PAX6
M05414_2.00 		Homo sapiens
NYRCGCNYSRNYRVNYN
NRNBYRNYSRNGCGYRN		 SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX 		0.853 0.853
PAX6
M02689_2.00 		Homo sapiens
TTYACGCWTSANTK
MANTSAWGCGTRAA		 SELEX
Mathelier et al.(2014)
MA0069.1 		0.853 0.853
PAX6
M09216_2.00 		Homo sapiens
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C 		0.853 0.853
Pax6
M09217_2.00 		Mus musculus
TYMYRCWTSRNT
ANYSAWGYRKRA		 Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C 		0.853 0.853
PAX6
M10806_2.00 		Homo sapiens
NHNNTTYACGCWTSANTKVHH
DDBMANTSAWGCGTRAANNDN		 Transfac
Matys et al.(2006)
V$PAX6_01 		0.853 0.853
PAX6
M10807_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX6_Q2 		0.853 0.853
PAX6
M05413_2.00 		Homo sapiens
DYRCGCWTSRNYRMNYN
NRNKYRNYSAWGCGYRH		 SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX 		0.853 0.853
PAX6
M05415_2.00 		Homo sapiens
NYACGCHYSRNYRMHYN
NRDKYRNYSRDGCGTRN		 SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX 		0.853 0.853
PAX6
M00335_2.00 		Homo sapiens
BRNNNNNN
NNNNNNYV		 PBM
Barrera et al.(2016)
PAX6_A79E 		0.847 0.847
PAX6
M00336_2.00 		Homo sapiens
RTGCACAC
GTGTGCAY		 PBM
Barrera et al.(2016)
PAX6_F258S 		0.847 0.847
PAX6
M00337_2.00 		Homo sapiens
NMTAATTANNN
NNNTAATTAKN		 PBM
Barrera et al.(2016)
PAX6_P118R 		0.847 0.847
PAX6
M00338_2.00 		Homo sapiens
WSGVRVDR
YHBYBCSW		 PBM
Barrera et al.(2016)
PAX6_P68S 		0.847 0.847
PAX6
M00339_2.00 		Homo sapiens
NNNNSGKVGGHNN
NNDCCBMCSNNNN		 PBM
Barrera et al.(2016)
PAX6_R128C 		0.847 0.847
PAX6
M00340_2.00 		Homo sapiens
NNNNNRN
NYNNNNN		 PBM
Barrera et al.(2016)
PAX6_R242T 		0.847 0.847
PAX6
M00341_2.00 		Homo sapiens
BTSCCCSGSC
GSCSGGGSAV		 PBM
Barrera et al.(2016)
PAX6_R26G 		0.847 0.847
PAX6
M00343_2.00 		Homo sapiens
NNNNCCCVKCNBN
NVNGMBGGGNNNN		 PBM
Barrera et al.(2016)
PAX6_S119R 		0.847 0.847
PAX6
M00344_2.00 		Homo sapiens
NNMSASGBYNNN
NNNRVCSTSKNN		 PBM
Barrera et al.(2016)
PAX6_V126D 		0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV57892 Paired box 45 169
EFV57892 Homeodomain 228 279

Links

Other Homeodomain,Paired box family TFs
Other Trichinella spiralis TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TTRE_0000173501 Trichuris trichiura TTRE_0000173501 I 0.921
D918_01592 Trichuris suis D918_01592 I 0.901
TMUE_s0038005250 Trichuris muris TMUE_s0038005250 I 0.901
Sakowv30026828m.g Saccoglossus kowalevskii Sakowv30026828m.g I 0.868
ADAC001560 Anopheles darlingi ADAC001560 I 0.865
ey Drosophila melanogaster FBgn0005558 D 0.864
csin110224 Clonorchis sinensis csin110224 I 0.862
pax6a Danio rerio ENSDARG00000103379 I 0.859
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.853
pax6b Danio rerio ENSDARG00000045936 I 0.853
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.853
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.853
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.853
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.853
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.853
ENSGACG00000002490 Gasterosteus aculeatus ENSGACG00000002490 I 0.853
ACYPI008177 Acyrthosiphon pisum ACYPI008177 I 0.853
pax6.S Xenopus laevis XB-GENE-6464331 I 0.853
ENSORLG00000000847 Oryzias latipes ENSORLG00000000847 I 0.847
L798_00712 Zootermopsis nevadensis L798_00712 I 0.847
PAX6 Homo sapiens ENSG00000007372 D 0.847
GF21877 Drosophila ananassae FBgn0098877 I 0.847
TC007409 Tribolium castaneum TC007409 I 0.842
Cflo_00481--XP_394648.3_APIME Camponotus floridanus Cflo_00481--XP_394648.3_APIME I 0.841
GB41504 Apis mellifera GB41504 I 0.841
Hsal_09597--XP_394648.3_APIME Harpegnathos saltator Hsal_09597--XP_394648.3_APIME I 0.841
NV17076 Nasonia vitripennis NV17076 I 0.841
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.835
GI14081 Drosophila mojavensis FBgn0136835 I 0.835
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.835
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.835
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.835
ey Drosophila persimilis FBgn0043659 I 0.835
ey Drosophila pseudoobscura FBgn0018538 I 0.835
GG16399 Drosophila erecta FBgn0108631 I 0.835
ey Drosophila sechellia FBgn0068720 I 0.835
GF22818 Drosophila ananassae FBgn0099812 I 0.835
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.835
GK13702 Drosophila willistoni FBgn0215710 I 0.835
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.835
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.835
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.835
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.835
PAX6 Felis catus ENSFCAG00000007094 I 0.835
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.835
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.835
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.835
GE14559 Drosophila yakuba FBgn0232158 I 0.835
ACYPI067710 Acyrthosiphon pisum ACYPI067710 I 0.835
D917_00854 Trichinella nativa D917_00854 I 0.833
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.830
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.830
toy Drosophila melanogaster FBgn0019650 D 0.830
ey Drosophila virilis FBgn0028754 I 0.830
GJ13300 Drosophila virilis FBgn0200526 I 0.830
GA27636 Drosophila pseudoobscura FBgn0249001 I 0.830
GE14563 Drosophila yakuba FBgn0232162 I 0.830
GB50342 Apis mellifera GB50342 I 0.830
NV15820 Nasonia vitripennis NV15820 I 0.830
TC008176 Tribolium castaneum TC008176 I 0.830
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.830
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.830
GI14042 Drosophila mojavensis FBgn0136796 I 0.830
GH23963 Drosophila grimshawi FBgn0131420 I 0.830
GL17563 Drosophila persimilis FBgn0155166 I 0.830
pax6 Xenopus tropicalis XB-GENE-484088 I 0.830
GK13683 Drosophila willistoni FBgn0215691 I 0.830
GG16402 Drosophila erecta FBgn0108634 I 0.830
GM13021 Drosophila sechellia FBgn0167952 I 0.830
PAX6 Sus scrofa ENSSSCG00000013320 I 0.830
PAX6 Microcebus murinus ENSMICG00000004089 I 0.830
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.830
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.830
Pax6 Mus musculus ENSMUSG00000027168 D 0.830
PAX6 Gallus gallus ENSGALG00000012123 I 0.830
DAPPUDRAFT_249978 Daphnia pulex DAPPUDRAFT_249978 I 0.830
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.830
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.830
PAX6 Bos taurus ENSBTAG00000004561 I 0.830
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.830
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.830
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.830
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.830
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.830
pax6b Oryzias latipes ENSORLG00000009913 I 0.830
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.830
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.830
PAX6 Procavia capensis ENSPCAG00000005165 I 0.830
T265_14971 Opisthorchis viverrini T265_14971 I 0.829
L798_11483 Zootermopsis nevadensis L798_11483 I 0.829
pax6.L Xenopus laevis XB-GENE-865046 I 0.824
ENSTRUG00000017375 Takifugu rubripes ENSTRUG00000017375 I 0.824
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I 0.824
pax6b Takifugu rubripes ENSTRUG00000006935 I 0.824
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.824
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.824
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.824
SMU15027897 Schmidtea mediterranea SMU15027897 I 0.824
ENSGMOG00000019087 Gadus morhua ENSGMOG00000019087 I 0.824
PAX6 Sorex araneus ENSSARG00000011424 I 0.821
PHUM097050 Pediculus humanus PHUM097050 I 0.820
GD24416 Drosophila simulans FBgn0195753 I 0.819
PAX6 Monodelphis domestica ENSMODG00000009611 I 0.819
ENSAMXG00000001228 Astyanax mexicanus ENSAMXG00000001228 I 0.819
DAPPUDRAFT_249991 Daphnia pulex DAPPUDRAFT_249991 I 0.819
Cmyd_10016391 Chelonia mydas Cmyd_10016391 I 0.818
Ogr12767 Ophisaurus gracilis Ogr12767 I 0.813
SMAR013763 Strigamia maritima SMAR013763 I 0.813
Smp_160670 Schistosoma mansoni Smp_160670 I 0.813
CGI_10027695 Crassostrea gigas CGI_10027695 I 0.813
L596_g12356 Steinernema carpocapsae L596_g12356 I 0.813
LotgiG133720 Lottia gigantea LotgiG133720 I 0.813
L892_g3713 Steinernema scapterisci L892_g3713 I 0.813
PAX6 Echinops telfairi ENSETEG00000002655 I 0.809
PAX6 Equus caballus ENSECAG00000021000 I 0.808
T265_09221 Opisthorchis viverrini T265_09221 I 0.808
ENSTNIG00000002471 Tetraodon nigroviridis ENSTNIG00000002471 I 0.808
ENSCING00000006503 Ciona intestinalis ENSCING00000006503 I 0.808
ENSPPYG00000003386 Pongo abelii ENSPPYG00000003386 I 0.808
ENSCSAVG00000007987 Ciona savignyi ENSCSAVG00000007987 I 0.808
SMTD_0000837201 Schistosoma mattheei SMTD_0000837201 I 0.802
A_05170 Schistosoma haematobium A_05170 I 0.802
ASTEI06205 Anopheles stephensi ASTEI06205 I 0.795
ADIR000973 Anopheles dirus ADIR000973 I 0.795
ACHR009845 Anopheles christyi ACHR009845 I 0.795
AFUN011570 Anopheles funestus AFUN011570 I 0.795
AMIN002132 Anopheles minimus AMIN002132 I 0.795
AATE014626 Anopheles atroparvus AATE014626 I 0.795
AMEM002691 Anopheles merus AMEM002691 I 0.791
AMEC013051 Anopheles melas AMEC013051 I 0.791
AEPI005798 Anopheles epiroticus AEPI005798 I 0.791
AQUA008313 Anopheles quadriannulatus AQUA008313 I 0.791
D915_07175 Fasciola hepatica D915_07175 I 0.791
AFAF017899 Anopheles farauti AFAF017899 I 0.791
AGAP000067 Anopheles gambiae AGAP000067 I 0.791
CRE07226 Caenorhabditis remanei CRE07226 I 0.791
AARA001110 Anopheles arabiensis AARA001110 I 0.791
csin101119 Clonorchis sinensis csin101119 I 0.790
ISCW021772 Ixodes scapularis ISCW021772 I 0.790
RSKR_0000862000 Rhabditophanes kr3021 RSKR_0000862000 I 0.786
CBN04513 Caenorhabditis brenneri CBN04513 I 0.786
SVE_0819200 Strongyloides venezuelensis SVE_0819200 I 0.786
SPAL_0001466800 Strongyloides papillosus SPAL_0001466800 I 0.786
PTRK_0000512100 Parastrongyloides trichosuri PTRK_0000512100 I 0.786
SSTP_0001059400 Strongyloides stercoralis SSTP_0001059400 I 0.786
AAEL002321 Aedes aegypti AAEL002321 I 0.785
vab-3 Caenorhabditis elegans WBGene00006870 I 0.780
HelroG80374 Helobdella robusta HelroG80374 I 0.780
Smp_170750 Schistosoma mansoni Smp_170750 I 0.775
AALB006643 Anopheles albimanus AALB006643 I 0.774
ACUA016154 Anopheles culicifacies ACUA016154 I 0.774
ASIS012967 Anopheles sinensis ASIS012967 I 0.769
MCOS_0000220101 Mesocestoides corti MCOS_0000220101 I 0.769
ASTEI06200 Anopheles stephensi ASTEI06200 I 0.769
AARA001115 Anopheles arabiensis AARA001115 I 0.769
AQUA008308 Anopheles quadriannulatus AQUA008308 I 0.769
AALB006354 Anopheles albimanus AALB006354 I 0.769
AGAP000063 Anopheles gambiae AGAP000063 I 0.769
AMIN002127 Anopheles minimus AMIN002127 I 0.769
CpipJ_CPIJ006398 Culex pipiens CpipJ_CPIJ006398 I 0.768
CPIJ006398 Culex quinquefasciatus CPIJ006398 I 0.768
ISCW006352 Ixodes scapularis ISCW006352 I 0.764
AMEC021831 Anopheles melas AMEC021831 I 0.764
AFUN011575 Anopheles funestus AFUN011575 I 0.764
BXY_1643500 Bursaphelenchus xylophilus BXY_1643500 I 0.763
ASIS012617 Anopheles sinensis ASIS012617 I 0.762
MCINX016249 Melitaea cinxia MCINX016249 I 0.757
ACUA021227 Anopheles culicifacies ACUA021227 I 0.757
LLOJ005149 Lutzomyia longipalpis LLOJ005149 I 0.757
ADAC003449 Anopheles darlingi ADAC003449 I 0.754
AFAF009619 Anopheles farauti AFAF009619 I 0.754
ACHR008920 Anopheles christyi ACHR008920 I 0.753
CPIJ006390 Culex quinquefasciatus CPIJ006390 I 0.751
CpipJ_CPIJ006390 Culex pipiens CpipJ_CPIJ006390 I 0.751
HelroG173449 Helobdella robusta HelroG173449 I 0.750
ENSTSYG00000011965 Tarsius syrichta ENSTSYG00000011965 I 0.739
PAX6 Ornithorhynchus anatinus ENSOANG00000015149 I 0.736
tetur09g00660 Tetranychus urticae tetur09g00660 I 0.736
AEPI005803 Anopheles epiroticus AEPI005803 I 0.731
PAX6 Pan troglodytes ENSPTRG00000003474 I 0.730
Afo_R014630 Aptenodytes forsteri Afo_R014630 I 0.727
TsM_000166900 Taenia solium TsM_000166900 I 0.709
HmN_000466300 Hymenolepis microstoma HmN_000466300 I 0.703