CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE20122
(
Drosophila yakuba
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0237445
T237613_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
1.000
1.000
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
1.000
1.000
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.864
0.864
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0265132
Paired box
126
230
NLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINRILR
FBpp0265132
Homeodomain
381
437
RRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Drosophila yakuba
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GD12721
Drosophila simulans
FBgn0184448
I
1.000
GM24657
Drosophila sechellia
FBgn0179520
I
1.000
toe
Drosophila melanogaster
FBgn0036285
D
1.000
GG13832
Drosophila erecta
FBgn0106095
I
1.000
GF24980
Drosophila ananassae
FBgn0101972
I
0.981
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.975
GJ13266
Drosophila virilis
FBgn0200492
I
0.969
GH16065
Drosophila grimshawi
FBgn0123536
I
0.969
GI12329
Drosophila mojavensis
FBgn0135086
I
0.926
AGAP011417
Anopheles gambiae
AGAP011417
I
0.914
GK12629
Drosophila willistoni
FBgn0214638
I
0.895
MDOA006963
Musca domestica
MDOA006963
I
0.883
LCUP004290
Lucilia cuprina
LCUP004290
I
0.883
PHUM427950
Pediculus humanus
PHUM427950
I
0.870
TC007194
Tribolium castaneum
TC007194
I
0.870
GK12628
Drosophila willistoni
FBgn0214637
I
0.864
GE20121
Drosophila yakuba
FBgn0237444
I
0.864
GJ13265
Drosophila virilis
FBgn0200491
I
0.864
GH16064
Drosophila grimshawi
FBgn0123535
I
0.864
eyg
Drosophila melanogaster
FBgn0000625
D
0.864
GF24979
Drosophila ananassae
FBgn0101971
I
0.864
GI12327
Drosophila mojavensis
FBgn0135084
I
0.864
GL24956
Drosophila persimilis
FBgn0162543
I
0.864
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.864
GM24656
Drosophila sechellia
FBgn0179519
I
0.864
GG13831
Drosophila erecta
FBgn0106094
I
0.864
KGM_15291
Danaus plexippus
KGM_15291
I
0.858
GD12719
Drosophila simulans
FBgn0184446
I
0.857
MDOA004637
Musca domestica
MDOA004637
I
0.852
LCUP004289
Lucilia cuprina
LCUP004289
I
0.846
HMEL010417
Heliconius melpomene
HMEL010417
I
0.842
AATE019032
Anopheles atroparvus
AATE019032
I
0.821
LLOJ009256
Lutzomyia longipalpis
LLOJ009256
I
0.802
AMAM022755
Anopheles maculatus
AMAM022755
I
0.798
ACYPI53909
Acyrthosiphon pisum
ACYPI53909
I
0.796
NV12005
Nasonia vitripennis
NV12005
I
0.722
GB55405
Apis mellifera
GB55405
I
0.722
Sakowv30011253m.g
Saccoglossus kowalevskii
Sakowv30011253m.g
I
0.704