CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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pax-3
(
Caenorhabditis elegans
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
WBGene00003939
T237678_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F27E5.2
Paired box
13
138
GQGRVNQLGGVFINGRPLPIHVRHAIISMAKKGIKPCHISRQLKVSHGAVSKILNRYAETGSISPGQIGGSPRARLTVQAVEKEILIACDENPQMSAAELRDWLIHKDICTKGNAPTVPAIKRLIG
F27E5.2
Homeodomain
188
244
RRNRTSFTAEQLDVLENAFRADTYPHANARESISKETGLSEEKIMTWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Caenorhabditis elegans
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN25420
Caenorhabditis brenneri
CBN25420
N
0.901
CBN03186
Caenorhabditis brenneri
CBN03186
N
0.901
CBG00861
Caenorhabditis briggsae
CBG00861
N
0.885
CRE04314
Caenorhabditis remanei
CRE04314
N
0.874
SMUV_0000066201
Syphacia muris
SMUV_0000066201
N
0.736
HPLM_0000710501
Haemonchus placei
HPLM_0000710501
N
0.709
HCOI01507400
Haemonchus contortus
HCOI01507400
N
0.709
ACAC_0000839201
Angiostrongylus cantonensis
ACAC_0000839201
N
0.703