CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MDOA006963
(
Musca domestica
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
MDOA006963
T237821_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
0.827
0.827
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
0.827
0.827
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.803
0.803
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA006963-PA
Paired box
15
136
TPHALGNIFSNGPTPAAALTSLASQNRLLELSRFGLRGYDLAQHFLTQQNAVSKLLGTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILR
MDOA006963-PA
Homeodomain
251
307
RRNRTTFSQDQLEELEKEFEKSHYPCVSTREKLASRTGLSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Musca domestica
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LCUP004290
Lucilia cuprina
LCUP004290
I
0.919
GI12329
Drosophila mojavensis
FBgn0135086
I
0.902
GF24980
Drosophila ananassae
FBgn0101972
I
0.895
GJ13266
Drosophila virilis
FBgn0200492
I
0.895
NV12005
Nasonia vitripennis
NV12005
I
0.890
GH16065
Drosophila grimshawi
FBgn0123536
I
0.890
SINV20456
Solenopsis invicta
SINV20456
I
0.888
PHUM427950
Pediculus humanus
PHUM427950
I
0.887
AGAP011417
Anopheles gambiae
AGAP011417
I
0.886
GE20122
Drosophila yakuba
FBgn0237445
I
0.883
GG13832
Drosophila erecta
FBgn0106095
I
0.883
GD12721
Drosophila simulans
FBgn0184448
I
0.877
GM24657
Drosophila sechellia
FBgn0179520
I
0.877
toe
Drosophila melanogaster
FBgn0036285
D
0.877
TC007194
Tribolium castaneum
TC007194
I
0.876
HMEL010417
Heliconius melpomene
HMEL010417
I
0.873
Hsal_03768--XP_394294.2_APIME
Harpegnathos saltator
Hsal_03768--XP_394294.2_APIME
I
0.873
AFAF005899
Anopheles farauti
AFAF005899
I
0.873
KGM_15291
Danaus plexippus
KGM_15291
I
0.873
GK12629
Drosophila willistoni
FBgn0214638
I
0.868
GI12327
Drosophila mojavensis
FBgn0135084
I
0.859
GJ13265
Drosophila virilis
FBgn0200491
I
0.859
GH16064
Drosophila grimshawi
FBgn0123535
I
0.859
GL24956
Drosophila persimilis
FBgn0162543
I
0.858
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.858
GK12628
Drosophila willistoni
FBgn0214637
I
0.854
eyg
Drosophila melanogaster
FBgn0000625
D
0.853
GM24656
Drosophila sechellia
FBgn0179519
I
0.853
GD12719
Drosophila simulans
FBgn0184446
I
0.851
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.844
GG13831
Drosophila erecta
FBgn0106094
I
0.843
GE20121
Drosophila yakuba
FBgn0237444
I
0.843
MCINX015151
Melitaea cinxia
MCINX015151
I
0.839
AATE019032
Anopheles atroparvus
AATE019032
I
0.837
GF24979
Drosophila ananassae
FBgn0101971
I
0.832
MDOA004637
Musca domestica
MDOA004637
I
0.827
LCUP004289
Lucilia cuprina
LCUP004289
I
0.827
tetur01g15740
Tetranychus urticae
tetur01g15740
I
0.820
Sakowv30011253m.g
Saccoglossus kowalevskii
Sakowv30011253m.g
I
0.813
ACYPI53909
Acyrthosiphon pisum
ACYPI53909
I
0.800
AMAM022755
Anopheles maculatus
AMAM022755
I
0.798
CPIJ002815
Culex quinquefasciatus
CPIJ002815
I
0.798
CpipJ_CPIJ002815
Culex pipiens
CpipJ_CPIJ002815
I
0.798
AMEC012384
Anopheles melas
AMEC012384
I
0.789
LLOJ009256
Lutzomyia longipalpis
LLOJ009256
I
0.771
GB55405
Apis mellifera
GB55405
I
0.761
DAPPUDRAFT_253988
Daphnia pulex
DAPPUDRAFT_253988
I
0.712
ACEP19922
Atta cephalotes
ACEP19922
I
0.707