CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPLM_0000710501
(
Haemonchus placei
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
HPLM_0000710501
T237854_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000710501-mRNA-1
Paired box
13
138
GQGRVNQLGGVFINGRPLPQAVRVQIIEMASKGVKPCHISRQLRVSHGAVSKILNRYAETGSISPGQIGGNPRSKISLQSIEKQLMVTYEENPNLCAAELRQLLIEQEVCSRATAPTVASINRFIR
HPLM_0000710501-mRNA-1
Homeodomain
185
241
RRNRTSFTAEQLETLENAFKMNTYPDAVEREQIAKQTGLTEEKIMTWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Haemonchus placei
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HCOI01507400
Haemonchus contortus
HCOI01507400
N
1.000
ACAC_0000839201
Angiostrongylus cantonensis
ACAC_0000839201
N
0.940
ACOC_0000203501
Angiostrongylus costaricensis
ACOC_0000203501
N
0.940
TELCIR_00729
Teladorsagia circumcincta
TELCIR_00729
N
0.918
HPBE_0001307101
Heligmosomoides bakeri
HPBE_0001307101
N
0.861
L596_g28013
Steinernema carpocapsae
L596_g28013
N
0.775
L892_g7002
Steinernema scapterisci
L892_g7002
N
0.775
L893_g26110
Steinernema glaseri
L893_g26110
N
0.775
L898_g1097
Steinernema monticolum
L898_g1097
N
0.769
SMUV_0000066201
Syphacia muris
SMUV_0000066201
N
0.764
L889_g18440
Steinernema feltiae
L889_g18440
N
0.764
Bm3656
Brugia malayi
Bm3656
N
0.742
nDi.2.2.2.g00518
Dirofilaria immitis
nDi.2.2.2.g00518
N
0.731
CBN25420
Caenorhabditis brenneri
CBN25420
N
0.720
CBN03186
Caenorhabditis brenneri
CBN03186
N
0.720
CBG00861
Caenorhabditis briggsae
CBG00861
N
0.709
CRE04314
Caenorhabditis remanei
CRE04314
N
0.709
pax-3
Caenorhabditis elegans
WBGene00003939
N
0.709
L893_g19326
Steinernema glaseri
L893_g19326
N
0.709
L596_g28015
Steinernema carpocapsae
L596_g28015
N
0.709