CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL46
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT2G28700
T252872_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AGL46
M10912_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$AT2G28700_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G28700.1
MADS box
10
58
YIFNDRMRKRSFKQRREGFLKKLNDLKVLCDVNACAVVYNPFNSNPDVW
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
0 Related TFs
">No related TF found