CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AT1G18960
(
Arabidopsis thaliana
)
Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00249 (Myb_DNA-binding)
IPR014778
AT1G18960
T266337_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT1G18960
M07011_2.00
Arabidopsis thaliana
NNNHNNHHNCAMCAACNNNNNH
DNNNNNGTTGKTGNDDNNDNNN
Dap-seq
OMalley et al.(2016)
AT1G18960_col_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.661
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G18960.1
Myb
10
20
KNPWTNEEDTT
AT1G18960.1
Myb
60
105
HESFTSEDEDLIIKMHAAMGSRWQLIAQHLPGKTEEEVKMFWNTKL
Links
Other
Myb/SANT
family TFs
Other
Arabidopsis thaliana
TFs
0 Related TFs
">No related TF found