CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSVPAG00000000127
(
Vicugna pacos
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSVPAG00000000127
T305171_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PPARA
M09295_2.00
Homo sapiens
NWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWN
Misc
Kulakovskiy et al.(2013)
PPARA_HUMAN.H11MO.0.B
0.378
1.000
Ppara
M09314_2.00
Mus musculus
HWSTRGGBSARAGGKBA
TVMCCTYTSVCCYASWD
Misc
Kulakovskiy et al.(2013)
PPARA_MOUSE.H11MO.0.A
0.378
1.000
PPARA
M11183_2.00
Homo sapiens
CWRAWCYAGGNCAWAGKTCA
TGAMCTWTGNCCTRGWTYWG
Transfac
Matys et al.(2006)
V$PPARA_01
0.378
1.000
PPARA
M11184_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PPARA_Q6
0.378
1.000
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSVPAP00000000118
Nuclear receptor
1
45
GFFRRTIRLKLVYDKCDRSCKIQKKNRNKCQYCRFHKCLSVGMSH
Links
Other
Nuclear receptor
family TFs
Other
Vicugna pacos
TFs
0 Related TFs
">No related TF found