CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NEMVEDRAFT_v1g245290
(
Nematostella vectensis
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05225 (HTH_psq)
IPR007889
NEMVEDRAFT_v1g245290
T313942_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO36879
Pipsqueak
115
156
SEEQMRMAIEHVLNGMKIRAAAEKFKVPRSTLGDRLLMAKYG
EDO36879
Pipsqueak
301
345
KGDDMKAAIHAVTKNGMAVRTAAKAYGIPRTTLKQYICKNKQESQ
EDO36879
Pipsqueak
354
399
SEEKMEQALVAIKTEDMPIRVAARKFQIPKSTLYDRVNRGDESIDQ
EDO36879
Pipsqueak
623
661
LMQKAVNEVLNGSCIRVAASKYGVPRSTLGDRVLTTRRN
EDO36879
Pipsqueak
789
831
SEENMERAIDAVERGMPVRLASKQFHIPRTTLTCRRLRRENRK
Links
Other
Pipsqueak
family TFs
Other
Nematostella vectensis
TFs
0 Related TFs
">No related TF found