CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CHLREDRAFT_21717
(
Chlamydomonas reinhardtii
)
SAND,Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01342 (SAND)
PF00505 (HMG_box)
IPR000770
IPR000910
CHLREDRAFT_21717
T322365_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO96754
Sox
214
281
ALQPNAYALFQLDMIRVYEEEGLHIDPPELQPIISNAWHQLTPEERAGYDGRAAAEAAAWSANAALYT
EDO96754
SAND
503
591
DLPASMPVSCCDVAGTFVMDGIKVVCQCKDCAGLPRAQREFHPTHWEQHCGAGTAKKWKASIKIEPGGAPEVPPGANPMQIGKWFDMLG
EDO96754
SAND
1147
1229
DDLPDELPVVCCGRHGLLYLRAQTVLHSGAVMTVSHFERICGRGDAKKWKASLLIVDEDGVGKQSVGDWLAENKIDSKMLNRL
EDO96754
SAND
1991
2065
NAPPEIPVVCNGMQGWFLVAQGLVRMQAGRVLSPTEFERVSGKAASKKWKVTLRVLQPDGSLGMTLGEQLVELGL
Links
Other
SAND,Sox
family TFs
Other
Chlamydomonas reinhardtii
TFs
0 Related TFs
">No related TF found