CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30007157m.g
(
Saccoglossus kowalevskii
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
Sakowv30007157m.g
T334339_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23932085_peptide
Sox
569
633
IKFTNGYPFFLREKYAQFKKKFPNKTMSEVRRMIHGKWTKLDPAEQKSYHIKAREQIQKTLNKSS
23932085_peptide
Sox
680
741
RRGFNILVRDMHKTLKRQYPDKVKKELMKIIHAKWQTMDKTEQEAYHRRARETMIRKRQRKY
23932085_peptide
Sox
784
838
MKKALGYAVFMKEWYKEVSKQHPDKSRLEVYQLIHEKWDALPRQEQLDYNIRAKG
23932085_peptide
Sox
872
930
RAYSTGYNIYSKEVYQEIRKDNPGRSHTDVMRLVGQKWKSLGLDSQKQYLEKALTARGL
23932085_peptide
Sox
1007
1065
KSSPFYRYYKWMSKRLSHKFKGKPKGSLKRYIVGKWLTLSEEEKDPYKEPYRIRRHAKI
Links
Other
Sox
family TFs
Other
Saccoglossus kowalevskii
TFs
0 Related TFs
">No related TF found