CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AtIDD11
(
Arabidopsis thaliana
)
Unknown
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
Unknown
Unknown
AT3G13810
T350196_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AtIDD11
M07334_2.00
Arabidopsis thaliana
DNWADAMGACAAADNNDNDDN
NHHNHNNHTTTGTCKTHTWNH
Dap-seq
OMalley et al.(2016)
AtIDD11_col_a
(Direct)
(Direct)
AtIDD11
M07335_2.00
Arabidopsis thaliana
HRNWAWAMGACAAAAHWN
NWDTTTTGTCKTWTWNYD
Dap-seq
OMalley et al.(2016)
AtIDD11_colamp_a
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G13810.3
Unknown
1
500
MSNLTSASGDQASVSSGNITEASGSNYFPHHQQQQEQQQQQIQKLSCSWTDSLFQLFDTVTFLEILYPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSDCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCEALAEETAREVVIPQNQNNNQPNPLLIHQSASHPHHHHQTQPTINVSSSSSSSHNHNIINSLHFDTNNGNTNNSNNSNNHLHTFPMKKEQQSNDHIMNYHHSIIPPWLAPQPHALTSSNPNPSNGGGGGGSLFSLASPAMSATALLQKAAQMGSTKTPPLPPTTAYERSTHNNNLTTTMAAMMTSPSGFISSNNNNHVLFQDYNASGFDNHGREEAFDDTFGGFLRTNEVTAAAGSEKSTKSGGGEGLTRDFLGLRPLMSHNEILSFAGLGSCINSSASDQLHPKPWQG
Links
Other
Unknown
family TFs
Other
Arabidopsis thaliana
TFs
0 Related TFs
">No related TF found