CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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lin-14
(
Caenorhabditis elegans
)
Unknown
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
Unknown
Unknown
WBGene00003003
T350340_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lin-14
M02724_2.00
Caenorhabditis elegans
GAACRB
VYGTTC
SELEX
Mathelier et al.(2014)
MA0261.1
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
T25C12.1b
Unknown
1
537
MDLPGTSSNDFVQPFSTFYPSPTSPPMHQAALLPALTALYPQLLQLPHLKSDYLIRSDMSAFKEVTDLRQAVNLILPMLPLYPTIGNGFNATGLAAQPTLQHVIQQSLLRKRPVAQTPTVPQPECPGQIRPVLSSPAAALQNVIMLNPWIMGSSLKPASPTLPNGQIPTTIGETSLQGTDDQTVKWIGPSSVDSNGQKTDSSAASAGDNQNIDVIGDGSESPTSSNHSAQEIALMTSQQTFLNALKDSSFLFTNPVPTVETAPPLRVAPPINGTTNGTAKAGGPERKPRKPVNDDIVKIVRNQDLSEENISMFEIPVPKAIASDPTFRPVSEQQIIQQIIQGKKYEEMEVGECMIQLCKKLAEKRVFGPRLMSQTTVAGLNHSNYANLPIKGICYIQHVCRKVLYDKFENEEDFWDKFREAMRKLAARCRRVRHAKKTKHNREEAQAEMLSKRYGEDMPFNLNGAGLIRPKVETVSPEANILNSDQIKSQLESLFAHIPKTESETPLIEIIQQNISLFTHLIRTKVESQSPPLQGPQ
Links
Other
Unknown
family TFs
Other
Caenorhabditis elegans
TFs
0 Related TFs
">No related TF found