CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TVAG_124790
(
Trichomonas vaginalis
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04001 (Vhr1)
IPR007147
TVAG_124790
T350449_2.00
EuPathDB (2015-Mar-30)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TVAG_124790
M02544_2.00
Trichomonas vaginalis
NNHNNNNNNN
NNNNNNNDNN
PBM
Weirauch et al.(2014)
pTH8219
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02544_2.00
VHR1
53
122
GVANIAIVMSYYNSTGKFKRFSDKILDYINETKASKDTGIINIYSNMLRNNLNFSTLASSNFQSMINIFA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TVAG_124790
VHR1
657
726
GVANIAIVMSYYNSTGKFKRFSDKILDYINETKASKDTGIINIYSNMLRNNLNFSTLASSNFQSMINIFA
Links
Other
VHR1
family TFs
Other
Trichomonas vaginalis
TFs
0 Related TFs
">No related TF found