|
HHAL007158-PA
(Halyomorpha halys)
Sox
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00505 (HMG_box) |
IPR000910 |
HHAL007158-PA |
T334849_2.00 |
Misc (2018-Jan-19) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
Tcf7l2
M00198_2.00 |
Mus musculus |
NSWTCAAAVN |
NBTTTGAWSN |
PBM
Badis et al.(2009)
Tcf7l2_3461
|
0.735
|
0.957
|
Tcf7l2
M02646_2.00 |
Mus musculus |
SATCAAAGN |
NCTTTGATS |
SELEX
Hallikas et al.(2006)
Tcf4
|
0.735
|
0.957
|
TCF7L2
M08167_2.00 |
Homo sapiens |
NVASWTCAAAGVVN |
NBBCTTTGAWSTBN |
ChIP-seq
Mathelier et al.(2014)
MA0523.1
|
0.735
|
0.957
|
TCF7L2
M09393_2.00 |
Homo sapiens |
DGCAGSTGKS |
SMCASCTGCH |
Misc
Kulakovskiy et al.(2013)
ITF2_HUMAN.H11MO.0.C
|
0.735
|
0.957
|
TCF7L2
M09394_2.00 |
Homo sapiens |
VVASWTCAAAGVV |
BBCTTTGAWSTBB |
Misc
Kulakovskiy et al.(2013)
TF7L2_HUMAN.H11MO.0.A
|
0.735
|
0.957
|
Tcf7l2
M09401_2.00 |
Mus musculus |
VVASWTCAAAGVV |
BBCTTTGAWSTBB |
Misc
Kulakovskiy et al.(2013)
TF7L2_MOUSE.H11MO.0.A
|
0.735
|
0.957
|
TCF7L2
M09638_2.00 |
Homo sapiens |
CCTTTGAWST |
ASWTCAAAGG |
Misc
Heinz et al.(2010)
K562-TCF7L2_GSE29196
|
0.735
|
0.957
|
TCF7L2
M11316_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF4_Q5_01
|
0.735
|
0.957
|
TCF7L2
M11317_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF4_Q5_02
|
0.735
|
0.957
|
TCF7L2
M11318_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF4_Q5
|
0.735
|
0.957
|
TCF7L2
M11319_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF7L2_06
|
0.735
|
0.957
|
Lef1
M00200_2.00 |
Mus musculus |
NSWTCAAAVN |
NBTTTGAWSN |
PBM
Badis et al.(2009)
Lef1_3504
|
0.735
|
0.942
|
LEF1
M03511_2.00 |
Homo sapiens |
NRAGATCAAAGRVWW |
WWBYCTTTGATCTYN |
SELEX
Jolma et al.(2013)
LEF1_1
|
0.735
|
0.942
|
LEF1
M05771_2.00 |
Homo sapiens |
NSATCAAAS |
STTTGATSN |
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_1
|
0.735
|
0.942
|
LEF1
M05772_2.00 |
Homo sapiens |
WCATCGRGRCGCTGW |
WCAGCGYCYCGATGW |
SELEX
Yin et al.(2017)
LEF1_eDBD_HT-SELEX_2
|
0.735
|
0.942
|
LEF1
M05775_2.00 |
Homo sapiens |
ASATCAAAG |
CTTTGATST |
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_1
|
0.735
|
0.942
|
LEF1
M05776_2.00 |
Homo sapiens |
ACATCGRGRCGCTGW |
WCAGCGYCYCGATGT |
SELEX
Yin et al.(2017)
LEF1_FL_HT-SELEX_2
|
0.735
|
0.942
|
LEF1
M05895_2.00 |
Homo sapiens |
WTCAAAGNNN |
NNNCTTTGAW |
SMiLE-seq
Isakova et al.(2017)
LEF1
|
0.735
|
0.942
|
LEF1
M09392_2.00 |
Homo sapiens |
BSYTTTSWNNTBYH |
DRVANNWSAAARSV |
Misc
Kulakovskiy et al.(2013)
LEF1_HUMAN.H11MO.0.A
|
0.735
|
0.942
|
Lef1
M09402_2.00 |
Mus musculus |
BSYTTTSWNNTBYH |
DRVANNWSAAARSV |
Misc
Kulakovskiy et al.(2013)
LEF1_MOUSE.H11MO.0.B
|
0.735
|
0.942
|
LEF1
M11311_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LEF1_Q2_01
|
0.735
|
0.942
|
LEF1
M11312_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LEF1_Q3
|
0.735
|
0.942
|
LEF1
M11313_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LEF1_Q4
|
0.735
|
0.942
|
LEF1
M11314_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LEF1_Q5_01
|
0.735
|
0.942
|
LEF1
M11315_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$LEF1_Q5
|
0.735
|
0.942
|
LEF1
M05773_2.00 |
Homo sapiens |
ASATCAAAG |
CTTTGATST |
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_1
|
0.735
|
0.942
|
LEF1
M05774_2.00 |
Homo sapiens |
WCATCGRGGCGCTGW |
WCAGCGCCYCGATGW |
SELEX
Yin et al.(2017)
LEF1_eDBD_Methyl-HT-SELEX_2
|
0.735
|
0.942
|
LEF1
M05777_2.00 |
Homo sapiens |
ASATCAAAG |
CTTTGATST |
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_1
|
0.735
|
0.942
|
LEF1
M05778_2.00 |
Homo sapiens |
ACATCGRGRCGCTGW |
WCAGCGYCYCGATGT |
SELEX
Yin et al.(2017)
LEF1_FL_Methyl-HT-SELEX_2
|
0.735
|
0.942
|
Tcf7l1
M00207_2.00 |
Mus musculus |
NNNNWWDN |
NHWWNNNN |
PBM
Badis et al.(2009)
Tcf3_3787
|
0.734
|
0.899
|
TCF7L1
M03512_2.00 |
Homo sapiens |
AAAGATCAAAGG |
CCTTTGATCTTT |
SELEX
Jolma et al.(2013)
TCF7L1_1
|
0.734
|
0.899
|
TCF7L1
M05779_2.00 |
Homo sapiens |
RSATCAAAG |
CTTTGATSY |
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_1
|
0.734
|
0.899
|
TCF7L1
M05780_2.00 |
Homo sapiens |
ACATCGRGRCGCTGW |
WCAGCGYCYCGATGT |
SELEX
Yin et al.(2017)
TCF7L1_eDBD_HT-SELEX_2
|
0.734
|
0.899
|
TCF7L1
M09395_2.00 |
Homo sapiens |
NBBCTTTGAWSTB |
VASWTCAAAGVVN |
Misc
Kulakovskiy et al.(2013)
TF7L1_HUMAN.H11MO.0.B
|
0.734
|
0.899
|
Tcf7l1
M09406_2.00 |
Mus musculus |
BBCTTTGAWST |
ASWTCAAAGVV |
Misc
Kulakovskiy et al.(2013)
TF7L1_MOUSE.H11MO.0.A
|
0.734
|
0.899
|
Tcf7l1
M09407_2.00 |
Mus musculus |
NDGCAGSTGBB |
VVCASCTGCHN |
Misc
Kulakovskiy et al.(2013)
TFE2_MOUSE.H11MO.0.A
|
0.734
|
0.899
|
TCF7L1
M11320_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF3_01
|
0.734
|
0.899
|
TCF7L1
M11321_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF3_Q6_01
|
0.734
|
0.899
|
TCF7L1
M11322_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF3_Q6
|
0.734
|
0.899
|
TCF7L1
M05781_2.00 |
Homo sapiens |
CTTTGATSY |
RSATCAAAG |
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_1
|
0.734
|
0.899
|
TCF7L1
M05782_2.00 |
Homo sapiens |
ACATCGRGRCGCTGW |
WCAGCGYCYCGATGT |
SELEX
Yin et al.(2017)
TCF7L1_eDBD_Methyl-HT-SELEX_2
|
0.734
|
0.899
|
pan
M06451_2.00 |
Drosophila melanogaster |
DWYCAAAD |
HTTTGRWH |
B1H
Zhu et al.(2011)
pan_FlyReg_FBgn0085432
|
0.714
|
0.899
|
pan
M08428_2.00 |
Drosophila melanogaster |
WHNAAAVRNRSCGM |
KCGSYNYBTTTNDW |
ChIP-chip
Mathelier et al.(2014)
MA0237.2
|
0.714
|
0.899
|
pan
M11337_2.00 |
Drosophila melanogaster |
AAGATCAAAGG |
CCTTTGATCTT |
Transfac
Matys et al.(2006)
I$TCF_1
|
0.714
|
0.899
|
pan
M11338_2.00 |
Drosophila melanogaster |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
I$TCF_Q6
|
0.714
|
0.899
|
Tcf7
M00193_2.00 |
Mus musculus |
HNHNNNNNN |
NNNNNNDND |
PBM
Badis et al.(2009)
Tcf7_0950
|
0.709
|
0.942
|
Tcf7
M03532_2.00 |
Mus musculus |
AAASATCAAAGV |
BCTTTGATSTTT |
SELEX
Jolma et al.(2013)
Tcf7_1
|
0.709
|
0.942
|
TCF7
M05755_2.00 |
Homo sapiens |
DSATCAAWS |
SWTTGATSH |
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_1
|
0.709
|
0.942
|
TCF7
M05756_2.00 |
Homo sapiens |
WCWKCGYCYCGWTGW |
WCAWCGRGRCGMWGW |
SELEX
Yin et al.(2017)
TCF7_eDBD_HT-SELEX_2
|
0.709
|
0.942
|
TCF7
M05890_2.00 |
Homo sapiens |
NNASATCAAASNN |
NNSTTTGATSTNN |
SMiLE-seq
Isakova et al.(2017)
TCF7
|
0.709
|
0.942
|
TCF7
M09386_2.00 |
Homo sapiens |
NBBCTTTSAWSTBNBN |
NVNVASWTSAAAGVVN |
Misc
Kulakovskiy et al.(2013)
TCF7_HUMAN.H11MO.0.A
|
0.709
|
0.942
|
Tcf7
M09400_2.00 |
Mus musculus |
VVRVADSAAARVVVNV |
BNBBBYTTTSHTBYBB |
Misc
Kulakovskiy et al.(2013)
TCF7_MOUSE.H11MO.0.A
|
0.709
|
0.942
|
TCF7
M11294_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF1_Q5_01
|
0.709
|
0.942
|
TCF7
M11295_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$TCF1_Q5
|
0.709
|
0.942
|
TCF7
M05757_2.00 |
Homo sapiens |
RSATCAAAS |
STTTGATSY |
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_1
|
0.709
|
0.942
|
TCF7
M05758_2.00 |
Homo sapiens |
WCAWCGRGRCGMWGW |
WCWKCGYCYCGWTGW |
SELEX
Yin et al.(2017)
TCF7_eDBD_Methyl-HT-SELEX_2
|
0.709
|
0.942
|
pop-1
M00712_2.00 |
Caenorhabditis elegans |
NNHDWVNNNN |
NNNNBWHDNN |
PBM
Narasimhan et al.(2015)
pTH9135
|
0.508
|
0.522
|
For this family, TFs with SR scores > 0.415 will likely have a similar motif |