CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GGTG_09945
(
Gaeumannomyces graminis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GGTG_09945
T118114_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU07952
M01890_2.00
Neurospora crassa
YWNMGCCHY
RDGGCKNWR
PBM
Weirauch et al.(2014)
pTH9003
0.784
0.897
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GGTG_09945T0
C2H2 ZF
498
520
FQCSLCPKRFTRAYNLRSHLRTH
GGTG_09945T0
C2H2 ZF
526
548
FVCNVCGKAFARQHDRKRHEGLH
GGTG_09945T0
C2H2 ZF
554
584
FVCKGDLKAGGQWGCGRRFARADALGRHFRS
Links
Other
C2H2 ZF
family TFs
Other
Gaeumannomyces graminis
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy