CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr7G11500_001
(
Musa acuminata
)
NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02365 (NAM)
IPR003441
GSMUA_Achr7G11500_001
T293439_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NAC92
M00979_2.00
Arabidopsis thaliana
NNDYACGBHA
TDVCGTRHNN
PBM
Lindemose et al.(2014)
ANAC092
0.874
0.770
NAC92
M00730_2.00
Arabidopsis thaliana
DYACGNHAN
NTDNCGTRH
PBM
Chang et al.(2013)
pTH7335
0.874
0.770
NAC92
M07234_2.00
Arabidopsis thaliana
TWNCKTGHNNHDCAMGYWAY
RTWRCKTGHDNNDCAMGNWA
Dap-seq
OMalley et al.(2016)
ANAC092_colamp_a
0.874
0.770
NAC92
M07235_2.00
Arabidopsis thaliana
WRCKTGTNNNDCAMG
CKTGHNNNACAMGYW
Dap-seq
OMalley et al.(2016)
ANAC092_col_v3a
0.874
0.770
For this family, TFs with SR scores >
0.870
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr7P11500_001
NAC/NAM
14
137
PPGFRFHPTDEELITHYLAPKVAGTSFCATVIGELDLNKREPWDLPCDTKVGDEWYFFCTKDRKYPTGLRTNRATDSGHWKATGKDKEIHRRRNLIGLKKTLVFYKGRAPKGEKTNWVMHEYRL
Links
Other
NAC/NAM
family TFs
Other
Musa acuminata
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy