CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN20
(
Homo sapiens
)
C2H2 ZF,Myb/SANT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF00249 (Myb_DNA-binding)
IPR007087
IPR014778
ENSG00000121903
T076671_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000355053
Myb
324
384
VHWGYEETKTFLAILSESPFSEKLRTCHQNRQVYRAIAEQLRARGFLRTLEQCRYRVKNLL
ENSP00000355053
Myb
484
544
VHWGYEETKAFLAILSESPFSEKLRTCHQNSQVYRAIAERLCALGFLRTLEQCRYRFKNLL
ENSP00000355053
C2H2 ZF
710
732
YKCDTCMKSFSRSSHFIAHQRIH
ENSP00000355053
C2H2 ZF
738
760
YKCLECGKNFSDRSNLNTHQRIH
ENSP00000355053
C2H2 ZF
766
788
YKCLECGKSFSDHSNLITHQRIH
ENSP00000355053
C2H2 ZF
794
816
YKCGECWKSFNQSSNLLKHQRIH
ENSP00000355053
C2H2 ZF
875
897
YECSECGRSFSKSSALISHQRIH
ENSP00000355053
C2H2 ZF
903
925
YECAECGKSFSKSSTLANHQRTH
ENSP00000355053
C2H2 ZF
931
953
YKCVDCGKCFSERSKLITHQRVH
ENSP00000355053
C2H2 ZF
959
981
YKCLECGKFFRDRSNLITHQRIH
ENSP00000355053
C2H2 ZF
987
1009
YKCRECGKCFNQSSSLIIHQRIH
ENSP00000355053
C2H2 ZF
1015
1037
YKCTECGKDFNNSSHFSAHRRTH
Links
Other
C2H2 ZF,Myb/SANT
family TFs
Other
Homo sapiens
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy