CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene31951-v1.0-hybrid
(
Fragaria vesca
)
AT hook,B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02178 (AT_hook)
PF02362 (B3)
IPR017956
IPR003340
gene31951-v1.0-hybrid
T018261_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna31951.1-v1.0-hybrid
B3
17
111
FFQIILPGYSTEHLRIPPRFIRKHIVNKPSKRATLKLKQSSQFSRNVEVRKSRGDVYLKDGWQEFLRDACLGDKEILVFVYNGNLSFNVKVFDKN
mrna31951.1-v1.0-hybrid
AT hook
134
144
KRPRGRPRKSS
mrna31951.1-v1.0-hybrid
AT hook
220
232
KRPRGRPRKYPVT
mrna31951.1-v1.0-hybrid
B3
269
316
SKLQYFTSKILKLSQVYVCKAFYVENLSPPNYDFVFLKNSEGTKWYKL
Links
Other
AT hook,B3
family TFs
Other
Fragaria vesca
TFs
0 Related TFs
">No related TF found