CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:dkey-217d24.6
(
Danio rerio
)
BED ZF,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
PF00096 (zf-C2H2)
IPR003656
IPR007087
ENSDARG00000096428
T024984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000126064
C2H2 ZF
38
60
VKCDFCHEKFKKSQSLASHARYH
ENSDARP00000126186
C2H2 ZF
35
57
HSCEFCGTNFETRPGLSSHARFH
ENSDARP00000126186
BED ZF
222
261
TTMTNSTKREDVHVCELCGAWYETRKGLSSHARSHLRQFG
ENSDARP00000126186
BED ZF
466
502
SRCHGESSKTVKCDFCHEKFKKSQSLASHARYHLRQL
ENSDARP00000126186
BED ZF
628
664
KTENQEPKQFVCCDYCGEMFDTRKALSCHARSHLRQL
ENSDARP00000126186
BED ZF
728
766
GAGCDATCELCGFDFENRKALASHARAHLRQQGVDWKVH
Links
Other
BED ZF,C2H2 ZF
family TFs
Other
Danio rerio
TFs
0 Related TFs
">No related TF found