CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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si:ch211-194b1.1
(
Danio rerio
)
BED ZF,C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
PF00096 (zf-C2H2)
IPR003656
IPR007087
ENSDARG00000102436
T024985_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human WIZ (WIZ zinc finger). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000141446
C2H2 ZF
323
345
FTCVECSIYFKKRTHLWEHMQEH
ENSDARP00000141446
C2H2 ZF
830
852
MRCEFCSAGFDTRAGLSSHARAH
ENSDARP00000141446
C2H2 ZF
996
1018
LKCSVCGATFETRRGLSTHSRSH
ENSDARP00000141446
BED ZF
1167
1203
NLTMDMDSKDIICQLCGAWFETRKGLSSHARAHLRHF
ENSDARP00000141446
C2H2 ZF
1326
1348
VSCEFCGELFENRKGLSSHARSH
ENSDARP00000141446
C2H2 ZF
1503
1525
IRCEFCGEFFENRKGLSSHARSH
ENSDARP00000141446
C2H2 ZF
1673
1694
SCELCGFYFENRKALASHARAH
Links
Other
BED ZF,C2H2 ZF
family TFs
Other
Danio rerio
TFs
0 Related TFs
">No related TF found