CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Cb00455
(
Panicum virgatum
)
BED ZF,NAC/NAM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
PF02365 (NAM)
IPR003656
IPR003441
Pavir.Cb00455
T025199_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Cb00455.1.p
NAC/NAM
52
168
SAATDKDVIGFVRANYERCKERNLCPPAPIDDAGRLTRPDPWELGRLWFITSKKFGSDEKTRGGFWKEKDNEFTAIRGDQWQQPAQRRPVYIGFKRTLEFYMNDGTKTEWLMNEFAM
Pavir.Cb00455.1.p
BED ZF
296
336
RKDSKRLVYAVCHHCDRVFRASSKNGTSSLRRHAEGCQFRH
Links
Other
BED ZF,NAC/NAM
family TFs
Other
Panicum virgatum
TFs
0 Related TFs
">No related TF found