CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_230040
(
Branchiostoma floridae
)
C2H2 ZF,THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF05485 (THAP)
IPR007087
IPR006612
estExt_fgenesh2_pg.C_230040
T077092_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_230040
THAP finger
400
497
DSTAVTEDTEDVIPEKGNLHKFPKDEKVRAEWVRNVRRTRGPGREGKEWTPSPTSRLCSEHFTEDCFDPAQDMRRSLGFNVKHRREVLPGKIPTIFLR
estExt_fgenesh2_pg.C_230040
C2H2 ZF
1052
1074
VTCEYCDMKFPSAQTLEKHLKTH
estExt_fgenesh2_pg.C_230040
C2H2 ZF
1116
1141
YKCEWKNCKSAFKRMFTLRNHVRHVH
estExt_fgenesh2_pg.C_230040
C2H2 ZF
1146
1170
FPCPYEGCTKTFGVRSVLLKHYKVH
estExt_fgenesh2_pg.C_230040
C2H2 ZF
1176
1198
HQCSYCGKMFQRHDHLRVHTRIH
estExt_fgenesh2_pg.C_230040
C2H2 ZF
1204
1227
FNCSLCNYGGRQANCLRWHMKTHH
Links
Other
C2H2 ZF,THAP finger
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found