CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_23000035
(
Branchiostoma floridae
)
C2H2 ZF,THAP finger
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF05485 (THAP)
IPR007087
IPR006612
fgenesh2_pg.scaffold_23000035
T077093_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_23000035
THAP finger
339
436
DSSAVTEDTEDILPEKGNLHKFPKDEKVRAEWVWNVRQTSGPDREGMEWTPSPTFRLCSEHFTDDCFDPAQDMRRSLGFNVKHHREVLPGKIPTIFLR
fgenesh2_pg.scaffold_23000035
C2H2 ZF
1006
1028
VTCEYCDMKFPSARTFEKHLKTH
fgenesh2_pg.scaffold_23000035
C2H2 ZF
1043
1062
FLCDHCGQFFNNKDFKRHEL
fgenesh2_pg.scaffold_23000035
C2H2 ZF
1070
1095
YKCEWKNCKSTFKRMFTLKNHVRHVH
fgenesh2_pg.scaffold_23000035
C2H2 ZF
1100
1124
FPCPYEGCEKTFGVRSVMMKHYKVH
fgenesh2_pg.scaffold_23000035
C2H2 ZF
1130
1152
HQCSYCGKMFQRPDHLRVHTRIH
fgenesh2_pg.scaffold_23000035
C2H2 ZF
1158
1181
FNCSLCNYGGRQANCLRWHMKTHH
Links
Other
C2H2 ZF,THAP finger
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found