CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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prdm5
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000006288
T090816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000106969
C2H2 ZF
169
192
YPCLLCESSFPSEDVLAEHLQSLH
ENSDARP00000106969
C2H2 ZF
202
223
FKCRSCGKEFPVRQALQRHLLH
ENSDARP00000106969
C2H2 ZF
238
258
YQCVLCHGSFSSQSSFLQHKE
ENSDARP00000106969
C2H2 ZF
266
291
FICKAESCGKRFKSKDALKKHKGNIH
ENSDARP00000106969
C2H2 ZF
299
321
LVCTICNKKCSSSLNLQEHRKVH
ENSDARP00000106969
C2H2 ZF
324
346
FDCDACDKKFISTNQLKRHMITH
ENSDARP00000106969
C2H2 ZF
352
374
YTCEICSRSFKRLDQATAHKIIH
ENSDARP00000106969
C2H2 ZF
380
402
YKCKLCWKEFAHRNVYKNHKKTH
ENSDARP00000106969
C2H2 ZF
408
430
FQCEECKALFRTPFSLQRHLLIH
ENSDARP00000106969
C2H2 ZF
436
459
FKCDHCDATFKRKDTLNVHIQVVH
ENSDARP00000106969
C2H2 ZF
465
487
YKCDLCEKAFVTPSVLKSHKKTH
ENSDARP00000106969
C2H2 ZF
494
515
ICPYCGQKFASNGTLRVHIRSH
ENSDARP00000106969
C2H2 ZF
521
543
YQCPYCDKAFSKNDGLKMHIRTH
ENSDARP00000106969
C2H2 ZF
549
571
YKCSECNKAFSQKRGLDEHMRTH
ENSDARP00000106969
C2H2 ZF
577
599
FQCDVCDLSFSLKKMLIRHKLTH
ENSDARP00000106969
C2H2 ZF
607
629
ECSLCHKKFTRNDYLKVHMENVH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
0 Related TFs
">No related TF found