CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0019s11040
(
Populus trichocarpa
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
POPTR_0019s11040
T126850_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0019s11040.1
C2H2 ZF
1
24
MCSVDDCHASYRRKDHLTRHLLHH
POPTR_0019s11040.1
C2H2 ZF
29
54
FKCEIENCDRKFVYLSNLKRHVRELH
POPTR_0019s11040.1
C2H2 ZF
69
93
YVCQELGCGKAFRYPSKLQKHEDSH
POPTR_0019s11040.1
C2H2 ZF
106
126
PGCMKHFSNKKCLKAHIQSCH
POPTR_0019s11040.1
C2H2 ZF
160
185
IKCHFKGCQHAFSTKTNLNQHVKAVH
POPTR_0019s11040.1
C2H2 ZF
191
217
YVCGFPGCDMRFSYKHVRDKHEKSGLH
Links
Other
C2H2 ZF
family TFs
Other
Populus trichocarpa
TFs
0 Related TFs
">No related TF found