CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG001116.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG001116.1
T132964_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG001116.1
C2H2 ZF
286
308
HVCTECEKTFSRGSSLNRHLRTH
Alligator_sinensis_CCG001116.1
C2H2 ZF
314
336
YQCPECEKSYASKSSLVVHQRIH
Alligator_sinensis_CCG001116.1
C2H2 ZF
342
364
FVCSNCGKSFMSNKSLRKHLKIH
Alligator_sinensis_CCG001116.1
C2H2 ZF
370
392
HRCPDCRKSFTDSSSYDIHRLIH
Alligator_sinensis_CCG001116.1
C2H2 ZF
398
420
YQCLECGKVFLEHSSLTKHQKKH
Alligator_sinensis_CCG001116.1
C2H2 ZF
426
448
CPCPDCGESYNDHSALAMHKRTH
Alligator_sinensis_CCG001116.1
C2H2 ZF
454
476
YECPHCGRCFRDRSTLVRHIRIH
Alligator_sinensis_CCG001116.1
C2H2 ZF
482
504
YKCPYCGKTFRASSTLTIHRRLH
Alligator_sinensis_CCG001116.1
C2H2 ZF
510
532
YQCPECEKDFRSSTGLTKHRRTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found