CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG004354.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG004354.1
T133068_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG004354.1
C2H2 ZF
74
96
YRCEDCGKSFSSSSALIIHRRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
102
124
YKCPECGNSFNQNSALIAHRRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
130
152
YACPDCGKSFSHGSTLIKHQRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
158
180
YTCEECGKSFSIRSTHVRHQKTH
Alligator_sinensis_CCG004354.1
C2H2 ZF
186
208
YVCGECGKSFSDSSYFVQHQRVH
Alligator_sinensis_CCG004354.1
C2H2 ZF
214
236
FTCRDCGKNFIWSSALVRHRRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
242
264
YRCPDCGKSFSENSTLMRHQRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
270
292
YKCTQCGKSFNDSSSLMRHQRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
298
320
YQCPDCGKSFVDSSTLICHQRTH
Alligator_sinensis_CCG004354.1
C2H2 ZF
326
348
YTCPDCGKSFTESSTLITHHRVH
Alligator_sinensis_CCG004354.1
C2H2 ZF
354
376
YTCPDCGKSFSQSSNLVTHQRIH
Alligator_sinensis_CCG004354.1
C2H2 ZF
382
404
YSCADCGKSFYRSSDLIRHHRTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found