CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG008969.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG008969.1
T133236_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG008969.1
C2H2 ZF
2
24
YQCRECSESFKDQQELRAHRGTH
Alligator_sinensis_CCG008969.1
C2H2 ZF
30
52
HPCAECGKSFRYKYRLVAHQRTH
Alligator_sinensis_CCG008969.1
C2H2 ZF
58
80
HLCPECGKAFARPEYLRVHQHIH
Alligator_sinensis_CCG008969.1
C2H2 ZF
86
108
YHCAECGKSFAFPSELQVHQRVH
Alligator_sinensis_CCG008969.1
C2H2 ZF
114
136
HHCTQCGKSFTRPSHLRIHQRIH
Alligator_sinensis_CCG008969.1
C2H2 ZF
142
164
YRCTECGKSFRESCFLTRHRRVH
Alligator_sinensis_CCG008969.1
C2H2 ZF
170
192
YCCTECEKSFDNPSHLSIHLRTH
Alligator_sinensis_CCG008969.1
C2H2 ZF
198
220
YHCAECGKSFGYRSALTKHQRIH
Alligator_sinensis_CCG008969.1
C2H2 ZF
226
248
YHCSDCGQSFTSPSSLRVHQRVH
Alligator_sinensis_CCG008969.1
C2H2 ZF
254
276
YCCTECGKSFTNPSNLRVHQRVH
Alligator_sinensis_CCG008969.1
C2H2 ZF
282
304
YQCTECGKSFTDPSHLRVHQRVH
Alligator_sinensis_CCG008969.1
C2H2 ZF
310
332
YSCSECGKSFKHPSHLRVHQRVH
Alligator_sinensis_CCG008969.1
C2H2 ZF
339
360
QCKECGKSFKSSSALSQHQQAH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found