CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG009373.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG009373.1
T133248_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG009373.1
C2H2 ZF
6
28
HQCSECGKSFRYSSRLVEHKHVH
Alligator_sinensis_CCG009373.1
C2H2 ZF
62
84
HQCTECGKSFSYSRQLALHQRIH
Alligator_sinensis_CCG009373.1
C2H2 ZF
90
112
HQCSDCGKSFRYSSELARHERIH
Alligator_sinensis_CCG009373.1
C2H2 ZF
118
140
HQCSECGKSFRYSSGLVEHKHVH
Alligator_sinensis_CCG009373.1
C2H2 ZF
146
168
YHCSECGKSFHYSSRLVEHKHVH
Alligator_sinensis_CCG009373.1
C2H2 ZF
174
196
HQCSECGKSFRYSSGLVEHKHVH
Alligator_sinensis_CCG009373.1
C2H2 ZF
202
230
YHCSECGKSFHYSSRLVEHKHSSTLAQHH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found