CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG018254.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG018254.1
T133397_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG018254.1
C2H2 ZF
231
253
HMCSKCGKSFTCLSTLAAHHQIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
287
309
YLCVTCAKIFTSFFSLVQHRRMH
Alligator_sinensis_CCG018254.1
C2H2 ZF
316
336
HCTKCKKNFISWQGLSQHQCV
Alligator_sinensis_CCG018254.1
C2H2 ZF
349
365
VKSFRKPTNLARHKSMH
Alligator_sinensis_CCG018254.1
C2H2 ZF
399
421
HDCSVCGKSFTDSSNLARHQLVH
Alligator_sinensis_CCG018254.1
C2H2 ZF
427
449
HHCFVCGKSFTQSYSLTQHQLIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
455
477
HQCSECGKSFTQSSNLAQHQLIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
483
505
HQCSVCGKSFSKSYGLAQHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
512
534
HQCSVCGKSFSKSYGLAQHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
541
563
HQCSVCGKSFSKSYGLAQHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
570
592
HQCSECGKSFTRFSRLAEHQHIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
599
622
HRCSECGKSFTYTSSLAQHKLIHH
Alligator_sinensis_CCG018254.1
C2H2 ZF
628
650
HQCSVCGKSFTYSSKLAQHQRMH
Alligator_sinensis_CCG018254.1
C2H2 ZF
656
678
HQCSVCGKSFTYSYSLAKHQLLH
Alligator_sinensis_CCG018254.1
C2H2 ZF
684
706
HQCSVCGKSFTYPSRLAQHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
712
734
YECSVCGKNFTHASNLAQHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
740
762
HQCSVCGKRFTQSSHLAEHQHIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
768
790
YQCPVCGKSFTHASNLAKHQCIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
796
818
HHCSECGKSFTYPYNLARHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
824
846
YECSECGKSFTHFSYLARHQLIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
852
874
HQCSESGKCFTQSSHLAEHQHTH
Alligator_sinensis_CCG018254.1
C2H2 ZF
880
902
HQCSVCGKRFMYPSRLAQHQRIH
Alligator_sinensis_CCG018254.1
C2H2 ZF
908
930
LKCPVCGKSFSKSYGLAQHQRFH
Alligator_sinensis_CCG018254.1
C2H2 ZF
937
959
YQCSECGKSFTQSSHLAKHQCIH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found