CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG018809.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG018809.1
T133408_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG018809.1
C2H2 ZF
177
199
FPCAQCGKGFGKKAHLTRHQRVH
Alligator_sinensis_CCG018809.1
C2H2 ZF
205
227
YPCDRCGRRFSQKIHLGSHQRVH
Alligator_sinensis_CCG018809.1
C2H2 ZF
233
255
FPCDHCGRCFRKKTHLLRHQRVH
Alligator_sinensis_CCG018809.1
C2H2 ZF
261
283
FPCDCCGRRFTHKQHLARHQQLH
Alligator_sinensis_CCG018809.1
C2H2 ZF
315
337
FTCQQCGKSFGWKKNLTSHQRLH
Alligator_sinensis_CCG018809.1
C2H2 ZF
343
365
FVCAECGRGFSDKRHLTAHLRGH
Alligator_sinensis_CCG018809.1
C2H2 ZF
371
393
YACAYCEKSFSHKPNLTIHQRSH
Alligator_sinensis_CCG018809.1
C2H2 ZF
399
421
FTCPDCGRGFAHPHHLVRHRRVH
Alligator_sinensis_CCG018809.1
C2H2 ZF
427
449
YTCSQCGRCFSSRPNLMAHAKAH
Alligator_sinensis_CCG018809.1
C2H2 ZF
455
477
HACEQCGRGFSRKSHLVRHQAVH
Alligator_sinensis_CCG018809.1
C2H2 ZF
485
505
CAQCGKHFSSKTNLARHQAVH
Alligator_sinensis_CCG018809.1
C2H2 ZF
511
533
YICTQCGKSFSRKTHLLRHERTH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found