CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG021408.1
(
Alligator sinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Alligator_sinensis_CCG021408.1
T133459_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG021408.1
C2H2 ZF
303
325
HPCPECKKSFSCPSRLALHKKKH
Alligator_sinensis_CCG021408.1
C2H2 ZF
359
381
HRCSECGKSFTQSSSLARHQLIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
387
409
YQCSVCGKRFSHSSNLAQHHRIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
415
437
HQCSVCGKGFTYSSHLARHRFIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
443
465
HQCSLCGKGFTDSSVLARHRFVH
Alligator_sinensis_CCG021408.1
C2H2 ZF
471
493
HQCSVCRKSFTDSSGLARHRFIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
501
521
CSECGKTFTHFSKLAQHQRIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
527
549
FRCSVCEKSFTCSSGLARHRFIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
713
735
YCCVTCGKTFTHFFSLVQHRRMH
Alligator_sinensis_CCG021408.1
C2H2 ZF
741
759
HRCTECRKNFISWQGLSQH
Alligator_sinensis_CCG021408.1
C2H2 ZF
769
791
HCCTRCGKSFRQPSSLARHRCMH
Alligator_sinensis_CCG021408.1
C2H2 ZF
797
819
HHCSVCGKSFISSSKLAQHQVIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
854
874
GSECGKSFTCSSHLAQHQRTH
Alligator_sinensis_CCG021408.1
C2H2 ZF
880
902
HLCTVCGKSFLSSSHLARHKRIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
908
930
HQCSECGKSFTQSSHLADHQHTH
Alligator_sinensis_CCG021408.1
C2H2 ZF
936
958
HQCSVCGKSFVRSCHLARHKRIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
964
987
HQCSECGKSFTFASNLSQHQLIHH
Alligator_sinensis_CCG021408.1
C2H2 ZF
993
1015
HQCSLCGKSFLRSFYLAEHQHIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
1021
1043
HRCSQCGKSFAYSSSLARHRHIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
1049
1071
HLCSQCGKSFTYSSDLARHQVTH
Alligator_sinensis_CCG021408.1
C2H2 ZF
1077
1099
HQCSECGKSFILPSTLAEHQCIH
Alligator_sinensis_CCG021408.1
C2H2 ZF
1105
1127
HRCSECGMSFTYFSYLAQHQIFH
Links
Other
C2H2 ZF
family TFs
Other
Alligator sinensis
TFs
0 Related TFs
">No related TF found