CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_3160074
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_gwp.C_3160074
T138921_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_3160074
C2H2 ZF
1
22
MCGECGYRTARKPNLSQHMRKH
estExt_gwp.C_3160074
C2H2 ZF
28
50
YKCDQCDYSAVQKSTLNNHLAKH
estExt_gwp.C_3160074
C2H2 ZF
56
78
YKCDQCDYSAARMSTLNQHLAKH
estExt_gwp.C_3160074
C2H2 ZF
84
106
YMCGECGYRAAYKSYLFRHMRTH
estExt_gwp.C_3160074
C2H2 ZF
112
134
YKCDQCDFSAGFMSTLNQHLAKH
estExt_gwp.C_3160074
C2H2 ZF
140
162
YMCGECGYRAAKKSHLTEHVRTH
estExt_gwp.C_3160074
C2H2 ZF
168
190
YKCDQCDYSATRKYHLDQHLAKH
estExt_gwp.C_3160074
C2H2 ZF
196
218
YMCGECGYRTARKPNLSQHMRKH
estExt_gwp.C_3160074
C2H2 ZF
224
246
YKCDQCDYSAVQKSTLNNHLAKH
estExt_gwp.C_3160074
C2H2 ZF
252
274
YMCGECGYRTAHKYAISIHMRTH
estExt_gwp.C_3160074
C2H2 ZF
280
302
YKCDQCDYSAADKSTLNRHLAIH
estExt_gwp.C_3160074
C2H2 ZF
308
330
YMCGECGYRATQKLHLSNHMRTH
estExt_gwp.C_3160074
C2H2 ZF
336
358
YKCDQCDYSSTQKCNLDKHLAIH
estExt_gwp.C_3160074
C2H2 ZF
364
386
YMCGECGYSVAQKSTLSQHMRTH
estExt_gwp.C_3160074
C2H2 ZF
432
454
HECNQCDYSAAQKSNLDNHLAKH
estExt_gwp.C_3160074
C2H2 ZF
460
482
YTCGECGYRTAIKSHISQHMRTH
estExt_gwp.C_3160074
C2H2 ZF
488
510
YKCDQCDYSAARKDSLDHHLAKH
estExt_gwp.C_3160074
C2H2 ZF
516
538
YMCGECGYMTTLKSDLSRHMRTH
estExt_gwp.C_3160074
C2H2 ZF
544
566
YKCDQCDYSAAQKSHLDKHLANH
estExt_gwp.C_3160074
C2H2 ZF
572
594
YMCGECGYRTAITSHISQHMRTH
estExt_gwp.C_3160074
C2H2 ZF
600
622
YKCDQCDYSAARKDSLDHHLAKH
estExt_gwp.C_3160074
C2H2 ZF
628
650
YMCGECGYMTTLKSDLSRHMRTH
estExt_gwp.C_3160074
C2H2 ZF
656
678
YKCDQCDYSAAQKSHLDKHLAKH
estExt_gwp.C_3160074
C2H2 ZF
684
706
YSCGECGHRTAYKSALSRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found