CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_105000036
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_105000036
T139084_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_105000036
C2H2 ZF
1
22
MCGECGYRTAQKSHLSRHMRTH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
28
50
YKCDQCDYSAAHKNSLDQHLAKH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
56
78
YMCEECGYRTAHKSTLSRHMRTH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
86
108
YKCDQCDFSTTRKYSLDQHLAKH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
114
136
YMCGECGYRTAKRSHFAEHMTTH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
158
180
YKCDQCDYSATQTSALNQHLAKH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
186
208
YMCGECGYRTAQKSHLSQHMRTH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
214
236
YKCNQCDYSAALKSTLDQHLAIH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
242
264
YMCGECGYRTAQKYTLSRHMRTH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
270
292
YKCDQCDFSAAVKITLDRHLAIH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
298
320
YMCGECGYRTTKKSHLAEHMRTH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
326
348
YKCDQCDYSAAHKSTLNQHLARH
fgenesh2_pg.scaffold_105000036
C2H2 ZF
354
376
YMCGQCGYRTTWKSQLSKHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found