CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh2_pg.scaffold_11000149
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000149
T139101_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000149
C2H2 ZF
91
113
FACSDCDFRASSKCFLLRHIRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
119
142
YKCDQCDYAAAQKSSLDKHIIAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
148
170
YMCEECGFRTAVRSQISVHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
176
198
YKCDQCEYSATQKRNLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
204
226
YICEECGYRTADRSHLSRHMVKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
232
254
YKCDQCEYSTSRKYHLDRHFLGH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
263
285
YKCDECDYRTARRGCLVQHAIRH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
291
313
YTCSQCEYRTARKQDLTSHMRIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
319
341
YKCDQCDYSTSWKTHLKRHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
347
369
YMCGECGYRAAQKVSLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
375
397
YKCHLCEYSAAEKGNLKNHLAQH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
403
425
YMCGQCGYSTTHLGSLRTHVRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
431
453
YKCDQCDFSCSTSGSLKRHQLTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
560
581
SCMECDFRASSKQDLSRHIRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
616
638
YKCEECGFRTAYRSSLILHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
644
666
YKCDQCEYSAAQKNSLDRHMVKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
674
696
FTCGECGYSTGDRFRLSLHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
702
724
YKCDQCDYSAAQKNSLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
730
752
YKCDQCDYSAAQKNSLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
758
780
YKCDQCKYSAAQKKTLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
786
808
FMCGECGYKTVERSDLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
814
836
YKCDQCEFSASSKCSFNQHLLRH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
842
864
YTCSECEFRTLHKSCLTVHMRIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
870
894
YKCDHSECDYVTSSKFNLDRHVLKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
900
922
YMCGECGYRAAQKISLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
928
950
YKCHLCEYSAAEKVSLKNHLAQH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
956
978
YMCGQCDYSTTYLGSLRTHVRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1072
1094
FACMECDFRASSKQGLSRHVRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1100
1122
YKCNQCEYAAAQKCSLDRHMDKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1128
1150
FMCDECGFRAAIRSRLSLHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1156
1178
YKCDHCDYSAALKTSLVNHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1184
1206
FKCDQCEYSATQKKNLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1212
1234
YMCGECGYRTTMRSDLSRHIRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1240
1262
YKCDQCKYSTSHKYHLDRHVLGH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1271
1293
YKCDECDYRTARKDCLGQHLLRH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1299
1321
YTCPQCEYRTIHKSCLTAHMQIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1327
1349
YKCDQCDYSTSWKTHLKRHMLKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1355
1377
YMCGECGYRAAQKVSLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1383
1405
FKCHLCEYSAAEKGSLKNHLAQH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1411
1433
YMCGQCGYSTTHLGSLRTHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1439
1461
YKCDQCDYSSTSSRNLKRHQLTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1554
1576
FACMECDFKASSRQDLSRHIRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1582
1605
YKCDHCDYAAAQKTTLDRHIVAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1611
1633
YKCEECGFRTAYRSSLILHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1639
1661
YKCDQCEYSAAQKNSLDRHMVKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1669
1691
FTCGECGYSTGDRFRLSLHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1697
1719
YKCDQCDYSAAQKNSLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1725
1747
YKCDQCDYSAAQKNSLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1753
1775
YKCDQCKYSAAQKKTLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1781
1803
FMCGECGYKTVERSDLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1809
1831
YKCDQCEFSASSKCSFNQHLLRH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1837
1859
YTCSECEFRTLHKSCLTVHMRIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1865
1889
YKCDHSECDYVTSSKFNLDRHVLKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1895
1917
YMCGECGYRAAQKISLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1923
1945
YKCHLCEYSAAEKVSLKNHLAQH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
1951
1973
YMCGQCDYSTTYLGSLRTHVRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2111
2133
HMCGKCGYRTGNRAHLFEHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2139
2161
YKCDKCGYSSAKKSNLDRHMFDH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2297
2319
FKCDKCEYSTAKKWHLNQHKLRH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2325
2347
YMCGECGYRTADRSHLSRHIVKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2353
2375
YKCDQCDYSAAQKGTLDQHMVIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2381
2403
YACGECGYRTARNSDLLKHLRIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2437
2459
YMCGECGYRTIVRSSLATHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2465
2487
YKCDQCEYSASRKNHLDRHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2493
2515
YMCGECGYRTVERSHLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2521
2543
YKCDQCEYSASRKNHLDRHLLGH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2552
2574
YKCDECDYSTARKDCLGQHLLRH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2580
2602
HACSECEFRTAHKSYLTTHMRIH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2608
2630
YKCDQCDYCTPWKTLLRRHMLKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2636
2658
YMCGECGYRAAQKVSLSRHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2664
2686
YKCHLCEYSAAEKGNLKNHLAQH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2692
2714
YMCGQCDYSTTNLANLRTHVRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2720
2742
YKCDQCDFSCSSTGSLKRHQLTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2913
2935
YRCDYCDFSSAYKNNLVLHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2941
2963
CMCGECGFRTANRSNLLEHMRTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2969
2991
FKCDQCDYSSAKKNNLDRHMFEH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
2997
3019
YMCGECGYSTANRTHLLDHAKTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3025
3047
FKCEQCDYSASRKNNLDRHMRKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3054
3076
YLCRQCGYSTDNMFYLSKHARTH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3080
3102
HKCDQCDYSTSRKPNLDRHMFKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3108
3130
YRCHLCDHSSAEKSDLDQHMAKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3136
3158
YMCEECGFRTAYRSSLSVHKRLH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3164
3186
YKCDQCDFSALQKAQLTQHMVKH
fgenesh2_pg.scaffold_11000149
C2H2 ZF
3192
3215
FLCGECGFRTGYMSNLSAHMKKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found