CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_11000176
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000176
T139104_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000176
C2H2 ZF
52
74
HVCEECGFKAAYKSHLSRHLRKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
80
102
YKCDQCEFSATQKYNLDQHKLRH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
108
130
YICGECGYRTAHKSSISVHMRIH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
136
158
YKCNQCDYSAAQKNNVKQHMLKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
164
185
YICGECGYRASRKSYVTAHIRR
fgenesh2_pg.scaffold_11000176
C2H2 ZF
192
214
FQCDICDFRATLKGHLDQHMAEH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
286
308
YKCDQCDYSAKQKLRLDVHKAKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
314
336
YVCGECGYSTADKSCLYRHMRKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
342
364
YRCDLCDYSSAHRISLVQHMAEH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
370
392
YKCEECGYRTAVSCNLSRHMARH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
398
420
YMCGECGYRTVNSDHLKVHMRKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
574
596
YKCDQCGYCATHIWQLERHMAKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
604
626
YKCEECGLRTADESYLSKHIRTH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
657
679
FMCGECGFKAVGKPELYKHMRMH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
685
707
YKCDQCDYSAEYKSILGRHMVIH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
713
735
YMCGECGYRTADKSALTKHMRTH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
741
764
FKCDQCDYSAIQKGQLDRHVLSRH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
770
792
YMCGECGYRTSDKSCLSKHMRKH
fgenesh2_pg.scaffold_11000176
C2H2 ZF
798
820
LMCGECGYRAADRSELSRHAKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found