CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_11000195
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000195
T139107_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000195
C2H2 ZF
21
43
HKCTYCDKEFPFKSKLNQHLRSH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
49
71
YLCGECGKRFNQLGNLKAHMRLH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
77
99
YKCEHCNKGFSQSTHLKRHVRIH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
246
268
YRCQECSRQFSRLSALKVHLRTH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
274
296
YKCEHCNKGFIHSGDLRTHIRIH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
302
324
YKCEECSKQFSTLSDLKNHMRIH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
330
352
YSCAECSKQFKQLGHLKTHMRIH
fgenesh2_pg.scaffold_11000195
C2H2 ZF
358
380
YRCEECRKQFTRVSSLKRHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found