CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_11000197
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000197
T139109_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000197
C2H2 ZF
27
49
HKCTVCAKVFRHKSKLSRHLRAH
fgenesh2_pg.scaffold_11000197
C2H2 ZF
55
77
YQCGECGKRCTQLVNLKAHMRSH
fgenesh2_pg.scaffold_11000197
C2H2 ZF
83
105
HVCNNCLKGFSTAVEMNIHMRIH
fgenesh2_pg.scaffold_11000197
C2H2 ZF
111
133
YMCDKCGKQFRQQKCLKIHMKTH
fgenesh2_pg.scaffold_11000197
C2H2 ZF
139
161
YSCEDCGKQCSQLTALREHMRTH
fgenesh2_pg.scaffold_11000197
C2H2 ZF
167
189
YRCAKCDKRFRQASTLRAHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found