CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_11000211
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000211
T139112_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000211
C2H2 ZF
24
46
HKCHHCDKEFRSKYELNRHLRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
52
74
YQCGECGKRFSKLSHLKDHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
80
102
YRCQDCSRQFSSMGHLKDHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
108
130
YKCEHCNKCFSQSTGLKTHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
136
158
YRCEECSKQFAILSALKSHMRIH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
164
186
YKCDSCNRRFSQSSSLKTHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
192
214
YKCEECSKQFTKLSDLKRHIRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
220
242
YKCEECSKQFIQLSHLKIHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
251
273
YQCGECGNRFGRLSHLKSHMKTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
279
301
YRCQECPRLFSELSNLKRHIRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
307
329
HKCEHCHKGFSESSDLKRHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
335
357
YRCEECSKQFTTLSSLKRHMRNH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
363
385
YRCEECSMQFTTLSDLKRHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
391
413
YRCEHCNKGFRHSAHLKTHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
419
441
YMCEECRKQFATLSHLKRHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
447
469
YNCETCSKQFSQLGTLKLHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
475
497
YKCEECSKQFNTLSNLKTHMRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
503
525
YKCEACSKQFSQLVTLKLHIRTH
fgenesh2_pg.scaffold_11000211
C2H2 ZF
531
553
HKCEACSMHFTQLSHLKSHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found