CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_11000261
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000261
T139117_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000261
C2H2 ZF
37
59
YKCDQCDYSAARKRYLDQHMANH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
65
87
YMCEKCGYMTAGRYELSRHMRKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
93
115
YKCDQCDYSAARKAHLDKHMAKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
121
143
YLCEQCGYRSASKSDLTVHLRKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
287
309
YNCDECDFSSSSKTSVKKHKAKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
313
335
FMCGECGYRTVDKSSLCKHMKTH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
341
363
FKCGECGYRAAVRFHLSEHIRTH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
369
391
YKCDRCDYSSAFKSGLNRHMIKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
397
419
YMCGECEYRTADRSSLTVHMREH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
425
448
YKCDQCNYSSARKNHLRKHAVEKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
482
504
FMCGECEYQTAARPDLAKHMRKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
510
532
HKCDQCDFSSARKDNLRKHMFKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
566
588
FMCGECEYRTAARPDLARHMTKH
fgenesh2_pg.scaffold_11000261
C2H2 ZF
594
616
HKCDQCDYSSARKDNLRKHMFKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found