CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_11000270
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_11000270
T139119_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_11000270
C2H2 ZF
122
144
YKCDQCDYSATRKDYLKSHLVKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
150
172
YMCGECGQRTAHRSALTKHMRIH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
178
200
YKCDQCNFSAARKDSFDNHIAKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
206
228
YMCGECGYRAAHMSDLTKHMRIH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
234
256
YKCDMCDYSSVRKRDLKRHMSKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
276
298
FICIECDYRTASKSDLVRHTKAH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
304
326
YKCDQCDYSAARKDYFDRHIAKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
332
354
YTCGDCEYKAACKSDLTTHMKIH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
360
382
YKCDICDYSSVRKYDLERHLSIH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
402
424
FACEKCDYMAAKKSDLFRHNRTH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
430
452
HKCDQCDYSATRKNYLDRHMTKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
458
480
FVCGECGFRTADNYNLNVHMRKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
486
511
YKCDQLQCDYSAAQKVTLDQHIAVKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
517
539
YKCDQCDYSAAQKCDLKKHMPKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
545
567
YLCDECGFRTANKSTLVKHLRNH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
573
595
YKCDQCDYSAARKSYLDQHKLRH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
669
691
YSCEECDFSSQSKTSLKKHKARH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
695
717
FKCGECGYRTVSMATLSYHMKRH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
723
745
YKCDQCDFSSAWKESLVLHMTRH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
751
773
FMCGECEFSTAAKHELVRHVRKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
779
801
HKCDQCDYASARKYSLRKHMLKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
807
829
FLCEECGFKTIYSSNLSMHMKRH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
835
857
YECDQCDFSSSWKESLARHMLVH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
863
885
YKCGECEYKTAVKNNLTKHLRTH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
891
913
HKCDQCEHRTATKANLAMHMRKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
919
942
YKCDQCDYSSARKGDLKKHMFRHH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
947
969
YDCDQCDYSTAWKASLVVHMSQH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
977
999
YMCEKCGYMTACRSDLLSHMKKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1014
1036
FMCEVCGYRTVKKSDFTVHQRKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1042
1064
YKCGQCDYSAARKSHVDQHMTTH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1070
1092
YLCEECGYGTVSKSHLTVHLRKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1207
1229
YMCGECGHRTVSMSDLSQHMKKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1235
1257
YKCDQCDYSSAWKKSLVLHMSHH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1263
1285
YKCGECEYRTAAKHDLVRHMRKH
fgenesh2_pg.scaffold_11000270
C2H2 ZF
1318
1340
FLCGECGYMAGDRSDLSKHMKKH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found