CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_111000015
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
fgenesh2_pg.scaffold_111000015
T139121_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_111000015
C2H2 ZF
50
72
YRCEECSKQFKLLGHLKVHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
78
100
YRCEKCSKQFRTQDHLRLHQRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
106
128
YKCKDCGKQFCQIGHLKRHMQTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
134
156
YRCEECSRQFSQLGHLKTHIRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
162
184
YRCEDCSRQFSQGSDLKRHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
190
212
FMCEECSWHFTDLSNLKKHIRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
218
240
HRCEECSRQFSALSDLKRHMKTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
246
268
YRCEECSKQFRRQSHLKSHMLTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
271
287
EKPYSTLSALKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
293
315
YKCEECSKQFGRPCDLKIHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
321
343
YRCEECSRQFSTLTGLKAHMKTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
350
371
ICKECRKQFSRPNHLKIHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
377
399
YRCEECRKQFRTLSNLKDHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
405
427
YRCEECSKQFSMLGNLKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
433
455
YRCEECRRQFSRLGSLRKHMRIH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
461
483
YRCEECSRQFSRMDILKKHMHTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
489
511
YRCEECSKQFSHPSHFKVHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
517
539
YRCEECSKQFSQLVNLESHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
545
567
YRCEECSKQFSHSSNLKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
573
595
YRCEECNRQFSLLNHLKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
601
623
YRCEDCSRQFSHLSHLKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
629
651
YSCEECFRQFGRLGHLKTHMLTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
657
679
YRCEECRKQFSTPDNLRKHQRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
685
707
YKCEECSRQFSHLCHLKTHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
713
735
YKCESCSKQFSQLSNLKVHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
741
763
YRCVECSRQFSVPGHLKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
769
791
YQCEECGRQFSQQGELKVHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
797
819
YSCEECSKQFSQPYQLKQHMQTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
825
847
YKCEDCSRQFSQLSNLKSHMRTH
fgenesh2_pg.scaffold_111000015
C2H2 ZF
853
875
YRCEECSKQFSQLSNLKTHMKTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
0 Related TFs
">No related TF found